U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CCNYL1B cyclin Y like 1B [ Homo sapiens (human) ]

Gene ID: 102724485, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
CCNYL1Bprovided by HGNC
Official Full Name
cyclin Y like 1Bprovided by HGNC
Primary source
HGNC:HGNC:56313
See related
Ensembl:ENSG00000284209
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.1) See more
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
16p11.2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (34351504..34381482, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:33969539-33970104 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:33973968-33974768 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:33974769-33975567 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:33975568-33976367 Neighboring gene microRNA 9901 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:33983595-33984222 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:33995254-33996238 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:33996239-33997223 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:33997877-33998727 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:34021303-34022136 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:34022137-34022969 Neighboring gene BCL2 associated transcription factor 1 pseudogene 2 Neighboring gene sal-like protein 3 Neighboring gene putative uncharacterized protein MGC34800

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000016.10 Chromosome 16 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

Genotypes

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
cyclin-Y-like protein 1B
Names
Cyclin-Y-like protein 1B
putative cyclin-Y-like protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    34351504..34381482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047435044.1 → XP_047291000.1  cyclin-Y-like protein 1B isoform X4

  2. XM_047435043.1 → XP_047290999.1  cyclin-Y-like protein 1B isoform X3

  3. XM_011546045.4 → XP_011544347.1  cyclin-Y-like protein 1B isoform X1

    See identical proteins and their annotated locations for XP_011544347.1

    UniProtKB/Swiss-Prot
    A0A8V8TMC4
    Related
    ENSP00000513283.1, ENST00000638228.3
    Conserved Domains (1) summary
    cl00050
    Location:123 → 209
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...

  4. XM_047435042.1 → XP_047290998.1  cyclin-Y-like protein 1B isoform X2

  5. XM_047435045.1 → XP_047291001.1  cyclin-Y-like protein 1B isoform X5

RNA

  1. XR_007065188.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A8V8TMC4.1 GenPept UniProtKB/Swiss-Prot:A0A8V8TMC4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases