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RMEL3 enriched in melanoma 3 [ Homo sapiens (human) ]

Gene ID: 102724122, updated on 10-Oct-2023

Summary

Official Symbol
RMEL3provided by HGNC
Official Full Name
enriched in melanoma 3provided by HGNC
Primary source
HGNC:HGNC:53975
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in fat (RPKM 1.8), stomach (RPKM 0.2) and 10 other tissues See more
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Genomic context

See RMEL3 in Genome Data Viewer
Location:
5q11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (57395107..57535413)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (58223824..58364126)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986381 Neighboring gene TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:56623358-56624557 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:56662505-56663704 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_86414 Neighboring gene spalt like transcription factor 4 pseudogene 1 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:56790121-56791320 Neighboring gene actin beta like 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16032 Neighboring gene uncharacterized LOC124901182 Neighboring gene lncRNA SMARCA2 (BRM) associated Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:56937789-56938367 Neighboring gene uncharacterized LOC101928505

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186596.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008780, AC025470

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    57395107..57535413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    58223824..58364126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)