U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MUC12-AS1 MUC12 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 102724094, updated on 29-Mar-2023

Summary

Official Symbol
MUC12-AS1provided by HGNC
Official Full Name
MUC12 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40382
See related
Ensembl:ENSG00000227053 AllianceGenome:HGNC:40382
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in colon (RPKM 7.6), small intestine (RPKM 1.4) and 9 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See MUC12-AS1 in Genome Data Viewer
Location:
7q22.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (101014320..101017608, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (102337056..102340344, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (100657601..100660889, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene mucin 12, cell surface associated Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:100640603-100641456 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:100641457-100642309 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:100658552-100659220 Neighboring gene Sharpr-MPRA regulatory region 8701 Neighboring gene mucin 17, cell surface associated Neighboring gene RN7SK pseudogene 54

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120519.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC105446
    Related
    ENST00000441882.1
  2. NR_120520.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC105446
    Related
    ENST00000448513.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    101014320..101017608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    102337056..102340344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)