Format

Send to:

Choose Destination

GPR84-AS1 GPR84, ZNF385A, ITGA5 and GTSF1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 102724050, updated on 21-Jan-2022

Summary

Official Symbol
GPR84-AS1provided by HGNC
Official Full Name
GPR84, ZNF385A, ITGA5 and GTSF1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:56187
See related
Ensembl:ENSG00000258137
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in appendix (RPKM 3.9), urinary bladder (RPKM 2.0) and 21 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See GPR84-AS1 in Genome Data Viewer
Location:
12q13.13
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (54353691..54467030)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (54747475..54860814)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene COPI coat complex subunit zeta 1 Neighboring gene microRNA 148b Neighboring gene RNA, 7SL, cytoplasmic 744, pseudogene Neighboring gene zinc finger protein 385A Neighboring gene G protein-coupled receptor 84 Neighboring gene integrin subunit alpha 5 Neighboring gene gametocyte specific factor 1 Neighboring gene NCK associated protein 1 like Neighboring gene phosphodiesterase 1B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120486.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    DA746386, DA746474
  2. NR_120487.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon and contains an alternate internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    DA746386
  3. NR_120488.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in all its exons from variant 1, resulting in a shorter transcript. It shares an internal exon with variant 2.
    Source sequence(s)
    AC079313
    Related
    ENST00000552053.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    54353691..54467030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center