Format

Send to:

Choose Destination

LOC102723553 small integral membrane protein 11B [ Homo sapiens (human) ]

Gene ID: 102723553, updated on 18-Aug-2021

Summary

Gene symbol
LOC102723553
Gene description
small integral membrane protein 11B
See related
Ensembl:ENSG00000273590
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SMIM11B
Annotation information
Note: GeneID:102723553 is on a scaffold that is thought to be a false duplication and thus this gene is likely redundant with GeneID:54065. [11 Jun 2021]
Expression
Ubiquitous expression in brain (RPKM 3.4), thyroid (RPKM 3.2) and 25 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC102723553 in Genome Data Viewer
Location:
21p11.2
Exon count:
7
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (7744951..7772253)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene CTBP2 pseudogene 9 Neighboring gene uncharacterized LOC102723360 Neighboring gene family with sequence similarity 243 member B Neighboring gene uncharacterized LOC105379504 Neighboring gene small integral membrane protein 34B Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 1B

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000021.9 Chromosome 21 Reference GRCh38.p13 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
uncharacterized protein LOC102723553

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001313692.1NP_001300621.1  uncharacterized protein LOC102723553 isoform b

    Status: VALIDATED

    Source sequence(s)
    AW901268, BP194116, CU633980, DB526804
    Consensus CDS
    CCDS82653.1
    UniProtKB/Swiss-Prot
    P58511
    Related
    ENSP00000482011.1, ENST00000619874.4
    Conserved Domains (1) summary
    pfam14981
    Location:453
    FAM165; FAM165 family
  2. NM_001394150.1NP_001381079.1  uncharacterized protein LOC102723553 isoform a

    Status: VALIDATED

    Source sequence(s)
    CU633980
  3. NM_001394151.1NP_001381080.1  uncharacterized protein LOC102723553 isoform a

    Status: VALIDATED

    Source sequence(s)
    CU633980
  4. NM_001394152.1NP_001381081.1  uncharacterized protein LOC102723553 isoform b

    Status: VALIDATED

    Source sequence(s)
    CU633980
    Conserved Domains (1) summary
    pfam14981
    Location:453
    FAM165; FAM165 family
  5. NM_001394153.1NP_001381082.1  uncharacterized protein LOC102723553 isoform b

    Status: VALIDATED

    Source sequence(s)
    CU633980
    Conserved Domains (1) summary
    pfam14981
    Location:453
    FAM165; FAM165 family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    7744951..7772253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017028205.1XP_016883694.1  uncharacterized protein LOC102723553 isoform X1

    UniProtKB/Swiss-Prot
    P58511
    Related
    ENSP00000485484.1, ENST00000624304.3
    Conserved Domains (1) summary
    pfam14981
    Location:453
    FAM165; FAM165 family

RNA

  1. XR_002958589.1 RNA Sequence

    Related
    ENST00000612624.4
Support Center