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rfxank regulatory factor X associated ankyrin containing protein [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102682605, updated on 3-Apr-2017

Summary

Gene symbol
rfxank
Gene description
regulatory factor X associated ankyrin containing protein
See related
Ensembl:ENSLOCG00000004761
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See rfxank in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
8
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG19 NC_023197.1 (6843172..6852146, complement)

Linkage Group LG19 - NC_023197.1Genomic Context describing neighboring genes Neighboring gene neurocan Neighboring gene nuclear receptor 2C2 associated protein Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene transmembrane protein 221 Neighboring gene myocyte enhancer factor 2B

Genomic regions, transcripts, and products

Genomic Sequence:
NC_023197.1 Chromosome LG19 Reference LepOcu1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023197.1 Reference LepOcu1 Primary Assembly

    Range
    6843172..6852146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015365325.1XP_015220811.1  DNA-binding protein RFXANK

    Related
    ENSLOCP00000005712.1, ENSLOCT00000005720.1
    Conserved Domains (3) summary
    cd00204
    Location:101221
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:111202
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:106137
    ANK; ANK repeat [structural motif]
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