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Oaf out at first homolog [ Mus musculus (house mouse) ]

Gene ID: 102644, updated on 8-Feb-2025

Summary

Official Symbol
Oafprovided by MGI
Official Full Name
out at first homologprovided by MGI
Primary source
MGI:MGI:94852
See related
Ensembl:ENSMUSG00000032014 AllianceGenome:MGI:94852
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D9Ucla1; D130038B21Rik
Summary
Orthologous to human OAF (out at first homolog). [provided by Alliance of Genome Resources, Feb 2025]
Expression
Broad expression in liver adult (RPKM 103.5), placenta adult (RPKM 46.4) and 18 other tissues See more
Orthologs
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Genomic context

See Oaf in Genome Data Viewer
Location:
9 A5.1; 9 24.24 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (43132575..43151113, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (43221278..43239816, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene POU domain, class 2, transcription factor 3 Neighboring gene STARR-seq mESC enhancer starr_23926 Neighboring gene ribosomal protein L26, pseudogene 6 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:43050540-43050727 Neighboring gene VISTA enhancer mm1617 Neighboring gene RIKEN cDNA D630033O11 gene Neighboring gene STARR-seq mESC enhancer starr_23931 Neighboring gene tripartite motif-containing 29

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

General protein information

Preferred Names
out at first protein homolog
Names
OAF homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178644.3NP_848759.1  out at first protein homolog precursor

    See identical proteins and their annotated locations for NP_848759.1

    Status: PROVISIONAL

    Source sequence(s)
    AC173346
    Consensus CDS
    CCDS23091.1
    UniProtKB/Swiss-Prot
    Q3UD27, Q8QZR4
    Related
    ENSMUSP00000034512.6, ENSMUST00000034512.7
    Conserved Domains (1) summary
    pfam14941
    Location:43280
    OAF; Transcriptional regulator, Out at first

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    43132575..43151113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)