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Nr6a1os nuclear receptor subfamily 6, group A, member 1, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 102640822, updated on 25-Jan-2022

Summary

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Official Symbol
Nr6a1osprovided by MGI
Official Full Name
nuclear receptor subfamily 6, group A, member 1, opposite strandprovided by MGI
Primary source
MGI:MGI:3649430
See related
AllianceGenome:MGI:3649430
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13507; Gm36800
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Nr6a1os in Genome Data Viewer
Location:
2 B; 2
Exon count:
12
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (38705986..38811875)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (38815972..38921863)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene Nr5a1 enhancer in intron 4 Neighboring gene Nr5a1 5' regulatory region Neighboring gene nuclear receptor subfamily 5, group A, member 1 Neighboring gene nuclear receptor subfamily 6, group A, member 1 Neighboring gene microRNA 181a-2 Neighboring gene microRNA 181b-2 Neighboring gene olfactomedin-like 2A Neighboring gene golgi autoantigen, golgin subfamily a,2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    38705986..38811875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004940923.1 RNA Sequence

  2. XR_866167.3 RNA Sequence

  3. XR_866166.3 RNA Sequence

  4. XR_374324.4 RNA Sequence

  5. XR_866174.3 RNA Sequence

  6. XR_004940924.1 RNA Sequence

  7. XR_866168.3 RNA Sequence

  8. XR_866169.3 RNA Sequence

  9. XR_866172.3 RNA Sequence

  10. XR_866173.3 RNA Sequence

  11. XR_866171.3 RNA Sequence

  12. XR_001783290.3 RNA Sequence

Nucleotide Protein Strain
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