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Gm34941 predicted gene, 34941 [ Mus musculus (house mouse) ]

Gene ID: 102638356, updated on 8-Feb-2024

Summary

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Official Symbol
Gm34941provided by MGI
Official Full Name
predicted gene, 34941provided by MGI
Primary source
MGI:MGI:5594100
See related
AllianceGenome:MGI:5594100
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm34941 in Genome Data Viewer
Location:
3 A3; 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (34743527..34747070)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (34689378..34692921)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene SOX2 overlapping transcript (non-protein coding) Neighboring gene Sox2 5' regulatory region Neighboring gene microRNA 1897 Neighboring gene Sox2 SRR2 enhancer Neighboring gene SRR18 enhancer downstream of Sox2 Neighboring gene SRY (sex determining region Y)-box 2 Neighboring gene N-4 enhancer downstream of Sox2 Neighboring gene STARR-seq mESC enhancer starr_07376 Neighboring gene STARR-seq mESC enhancer starr_07377 Neighboring gene STARR-seq mESC enhancer starr_07378 Neighboring gene predicted gene 3143 Neighboring gene STARR-seq mESC enhancer starr_07379 Neighboring gene STARR-seq mESC enhancer starr_07380 Neighboring gene Sox2 control region Neighboring gene predicted gene, 38509

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    34743527..34747070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_389667.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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