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Gm11816 predicted gene 11816 [ Mus musculus (house mouse) ]

Gene ID: 102638175, updated on 8-Feb-2024

Summary

Official Symbol
Gm11816provided by MGI
Official Full Name
predicted gene 11816provided by MGI
Primary source
MGI:MGI:3650294
See related
AllianceGenome:MGI:3650294
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in bladder adult (RPKM 1.8), genital fat pad adult (RPKM 1.1) and 15 other tissues See more
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Genomic context

See Gm11816 in Genome Data Viewer
Location:
4 A1; 4 4.09 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (9279258..9287391, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (9279258..9287391, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 50597 Neighboring gene predicted gene, 34288 Neighboring gene STARR-seq mESC enhancer starr_09535 Neighboring gene clavesin 1 Neighboring gene predicted gene, 23423 Neighboring gene STARR-seq mESC enhancer starr_09536 Neighboring gene STARR-seq mESC enhancer starr_09537 Neighboring gene predicted gene, 57727 Neighboring gene aspartate-beta-hydroxylase Neighboring gene STARR-seq mESC enhancer starr_09538 Neighboring gene NIMA (never in mitosis gene a)-related expressed kinase 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    9279258..9287391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_881109.3 RNA Sequence

  2. XR_001784235.3 RNA Sequence

  3. XR_004942059.1 RNA Sequence

  4. XR_390385.3 RNA Sequence

  5. XR_390383.3 RNA Sequence