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Gm17382 predicted gene, 17382 [ Mus musculus (house mouse) ]

Gene ID: 102638016, updated on 12-Jul-2022

Summary

Official Symbol
Gm17382provided by MGI
Official Full Name
predicted gene, 17382provided by MGI
Primary source
MGI:MGI:4937016
See related
Ensembl:ENSMUSG00000078838 AllianceGenome:MGI:4937016
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See Gm17382 in Genome Data Viewer
Location:
17 A3.3; 17 13.6 cM
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (27079151..27105220, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (26860177..26886246, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene NK2 homeobox 5 Neighboring gene VISTA enhancer mm1645 Neighboring gene predicted gene, 53221 Neighboring gene polymerase (RNA) II (DNA directed) polypeptide K pseudogene Neighboring gene predicted gene, 41555 Neighboring gene kinesin family member C5B Neighboring gene microRNA 6967-1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1)¬†

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168075.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC144621
    Related
    ENSMUST00000236777.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    27079151..27105220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_167717.1: Suppressed sequence

    Description
    NR_167717.1: This RefSeq was removed because it was annotated on the wrong strand.