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Gm27198 predicted gene 27198 [ Mus musculus (house mouse) ]

Gene ID: 102634658, updated on 8-Feb-2024

Summary

Official Symbol
Gm27198provided by MGI
Official Full Name
predicted gene 27198provided by MGI
Primary source
MGI:MGI:5521041
See related
AllianceGenome:MGI:5521041
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 1.3) See more
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Genomic context

Location:
14 E4; 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (118954940..118972572, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (118717528..118735160, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family C member 4 Neighboring gene STARR-seq mESC enhancer starr_37652 Neighboring gene predicted gene, 52104 Neighboring gene STARR-seq mESC enhancer starr_37657 Neighboring gene STARR-seq mESC enhancer starr_37658 Neighboring gene predicted gene, 41247 Neighboring gene STARR-seq mESC enhancer starr_37659 Neighboring gene STARR-seq mESC enhancer starr_37660 Neighboring gene STARR-positive B cell enhancer ABC_E7353 Neighboring gene predicted gene, 46484 Neighboring gene predicted gene, 22379

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166835.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC167668
  2. NR_166836.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC167668

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    118954940..118972572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)