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Acad11 acyl-Coenzyme A dehydrogenase family, member 11 [ Mus musculus (house mouse) ]

Gene ID: 102632, updated on 9-Apr-2019

Summary

Official Symbol
Acad11provided by MGI
Official Full Name
acyl-Coenzyme A dehydrogenase family, member 11provided by MGI
Primary source
MGI:MGI:2143169
See related
Ensembl:ENSMUSG00000090150
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI987948; 5730439E10Rik
Expression
Broad expression in liver adult (RPKM 65.5), kidney adult (RPKM 50.8) and 23 other tissues See more
Orthologs

Genomic context

See Acad11 in Genome Data Viewer
Location:
9; 9 F1
Exon count:
20
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (104063703..104127646)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (103966033..104029976)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene NSA2 ribosome biogenesis homolog pseudogene Neighboring gene ubiquitin-like modifier activating enzyme 5 Neighboring gene atypical chemokine receptor 4 Neighboring gene DnaJ heat shock protein family (Hsp40) member C13 Neighboring gene high mobility group box 1, related sequence 16 Neighboring gene predicted gene, 46130

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Endonuclease-mediated (1) 

Pathways from BioSystems

General gene information

Markers

Potential readthrough

Included gene: Nphp3

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 
long-chain-acyl-CoA dehydrogenase activity ISO
Inferred from Sequence Orthology
more info
 
medium-chain-acyl-CoA dehydrogenase activity ISO
Inferred from Sequence Orthology
more info
 
oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
oxidoreductase activity, acting on the CH-CH group of donors IEA
Inferred from Electronic Annotation
more info
 
very-long-chain-acyl-CoA dehydrogenase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
fatty acid beta-oxidation using acyl-CoA dehydrogenase ISO
Inferred from Sequence Orthology
more info
 
oxidation-reduction process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
mitochondrial membrane ISO
Inferred from Sequence Orthology
more info
 
mitochondrion HDA PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 
peroxisome ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
acyl-CoA dehydrogenase family member 11

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175324.4NP_780533.2  acyl-CoA dehydrogenase family member 11

    See identical proteins and their annotated locations for NP_780533.2

    Status: VALIDATED

    Source sequence(s)
    AI843434, AK077531
    Consensus CDS
    CCDS23458.1
    UniProtKB/Swiss-Prot
    Q80XL6
    UniProtKB/TrEMBL
    A0A0R4J0I6
    Related
    ENSMUSP00000043424.5, ENSMUST00000047799.12
    Conserved Domains (3) summary
    cd01155
    Location:376769
    ACAD_FadE2; Acyl-CoA dehydrogenases similar to fadE2
    PLN02876
    Location:6769
    PLN02876; acyl-CoA dehydrogenase
    cd05154
    Location:42292
    ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

    Range
    104063703..104127646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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