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LOC102596766 alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic-like [ Solanum tuberosum (potato) ]

Gene ID: 102596766, updated on 5-Sep-2025
Gene symbol
LOC102596766
Gene description
alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic-like
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Also known as
glgP
Annotation information
Annotation category: partial on reference assembly
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See LOC102596766 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2025_04 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006240541.1 (998..3921)
RS_2025_04 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006240596.1 (3788..4133)
RS_2025_04 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006240903.1 (208..1156)
RS_2025_04 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006241062.1 (335..1755, complement)
RS_2025_04 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006242201.1 (488..1017, complement)
RS_2025_04 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006243816.1 (1..688)

NW_006243816.1Genomic Context describing neighboring genes

NW_006242201.1Genomic Context describing neighboring genes

NW_006241062.1Genomic Context describing neighboring genes

NW_006240903.1Genomic Context describing neighboring genes

NW_006240596.1Genomic Context describing neighboring genes

NW_006240541.1Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Maturation and subcellular compartmentation of potato starch phosphorylase. Brisson N, et al. Plant Cell, 1989 May. PMID 2535551, Free PMC Article
  2. Molecular cloning of cDNA encoding potato amyloplast alpha-glucan phosphorylase and the structure of its transit peptide. Nakano K, et al. J Biochem, 1989 Oct. PMID 2481677
  3. Occurrence of a copia-like transposable element in one of the introns of the potato starch phosphorylase gene. Camirand A, et al. Mol Gen Genet, 1990 Oct. PMID 1703627
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic
Names
Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic
Starch phosphorylase L-1
alpha-glucan phosphorylase type L
starch phosphorylase L
NP_001275215.1

Length

  • 966

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001288286.1 → NP_001275215.1  alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic

    See identical proteins and their annotated locations for NP_001275215.1

    Status: PROVISIONAL

    Source sequence(s)
    X52385
    UniProtKB/Swiss-Prot
    P04045
    Conserved Domains (2) summary
    cd04300
    Location:82 → 960
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:83 → 960
    P_ylase; glycogen/starch/alpha-glucan phosphorylases

RefSeqs of Annotated Genomes: GCF_000226075.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006240541.1 Reference SolTub_3.0 Primary Assembly

    Range
    998..3921
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006240596.1 Reference SolTub_3.0 Primary Assembly

    Range
    3788..4133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006240903.1 Reference SolTub_3.0 Primary Assembly

    Range
    208..1156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006241062.1 Reference SolTub_3.0 Primary Assembly

    Range
    335..1755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006242201.1 Reference SolTub_3.0 Primary Assembly

    Range
    488..1017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006243816.1 Reference SolTub_3.0 Primary Assembly

    Range
    1..688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P04045.2 GenPept UniProtKB/Swiss-Prot:P04045

Gene LinkOut

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Molecular Biology Databases