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LUC7L LUC7 like [ Alligator mississippiensis (American alligator) ]

Gene ID: 102563595, updated on 10-Mar-2024

Summary

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Gene symbol
LUC7L
Gene description
LUC7 like
Locus tag
Y1Q_0009301
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
LUC7L-1
Orthologs
human mouse all
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Genomic context

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See LUC7L in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 13 NC_081836.1 (22820583..22865747, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710449.1 (1353837..1393995)

Chromosome 13 - NC_081836.1Genomic Context describing neighboring genes Neighboring gene Rho GDP dissociation inhibitor gamma Neighboring gene regulator of G protein signaling 11 Neighboring gene family with sequence similarity 234 member A Neighboring gene proline and glutamate rich with coiled coil 1 Neighboring gene chloride voltage-gated channel 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative RNA-binding protein Luc7-like 1
Names
LUC7-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081836.1 Reference rAllMis1 Primary Assembly

    Range
    22820583..22865747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019489976.2 → XP_019345521.1  putative RNA-binding protein Luc7-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NGN9

  2. XM_014602185.3 → XP_014457671.1  putative RNA-binding protein Luc7-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A151NGN9
    Conserved Domains (2) summary
    COG5200
    Location:5 → 230
    LUC7; U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification]
    pfam03194
    Location:5 → 241
    LUC7; LUC7 N_terminus
Nucleotide Protein
Heading Accession and Version

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