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RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Vicugna pacos (alpaca) ]

Gene ID: 102528695, updated on 8-Apr-2017

Summary

Gene symbol
RALGPS1
Gene description
Ral GEF with PH domain and SH3 binding motif 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs

Genomic context

See RALGPS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882754.1 (3325132..3572730, complement)

NW_005882754.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 8 Neighboring gene GTPase activating Rap/RanGAP domain like 3 Neighboring gene angiopoietin like 2 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene zinc finger and BTB domain containing 43

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005882754.1 Unplaced Scaffold Reference Vicugna_pacos-2.0.1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vicugna_pacos-2.0.1 Primary Assembly

Genomic

  1. NW_005882754.1 Reference Vicugna_pacos-2.0.1 Primary Assembly

    Range
    3325132..3572730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015240339.1XP_015095825.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4

    Conserved Domains (3) summary
    smart00147
    Location:21252
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:425540
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:424535
    PH; PH domain
  2. XM_015240338.1XP_015095824.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    Conserved Domains (3) summary
    smart00147
    Location:46258
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:431546
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:430541
    PH; PH domain
  3. XM_006205502.2XP_006205564.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5

    See identical proteins and their annotated locations for XP_006205564.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:391506
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:390501
    PH; PH domain
  4. XM_015240337.1XP_015095823.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:460575
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:459570
    PH; PH domain
  5. XM_015240336.1XP_015095822.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
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