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SCN5A sodium voltage-gated channel alpha subunit 5 [ Vicugna pacos (alpaca) ]

Gene ID: 102524756, updated on 8-Apr-2017

Summary

Gene symbol
SCN5A
Gene description
sodium voltage-gated channel alpha subunit 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs

Genomic context

See SCN5A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
101 current Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882725.1 (7411518..7515258, complement)

NW_005882725.1Genomic Context describing neighboring genes Neighboring gene activin A receptor type 2B Neighboring gene exo/endonuclease G Neighboring gene sodium voltage-gated channel alpha subunit 10 Neighboring gene sodium voltage-gated channel alpha subunit 11

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005882725.1 Unplaced Scaffold Reference Vicugna_pacos-2.0.1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
sodium channel protein type 5 subunit alpha
Names
sodium channel, voltage-gated, type V, alpha subunit

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vicugna_pacos-2.0.1 Primary Assembly

Genomic

  1. NW_005882725.1 Reference Vicugna_pacos-2.0.1 Primary Assembly

    Range
    7411518..7515258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015236213.1XP_015091699.1  sodium channel protein type 5 subunit alpha

    Conserved Domains (5) summary
    cd13433
    Location:14731525
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:12241481
    Ion_trans; Ion transport protein
    pfam06512
    Location:9551202
    Na_trans_assoc; Sodium ion transport-associated
    pfam11933
    Location:485578
    Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
    pfam16905
    Location:16721729
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
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