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DEPP1 DEPP autophagy regulator 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102478844, updated on 10-Mar-2024
Gene symbol
DEPP1
Gene description
DEPP autophagy regulator 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
all
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See DEPP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159692.1 (8344706..8346196, complement)

NW_006159692.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene Ras association domain family member 4 Neighboring gene uncharacterized LOC114007705 Neighboring gene zinc finger protein 22 Neighboring gene tryptophan--tRNA ligase, cytoplasmic-like

Genomic Sequence:
NW_006159692 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein DEPP1
Names
DEPP1 autophagy regulator

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159692.1 Reference TupChi_1.0

    Range
    8344706..8346196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006147677.3 → XP_006147739.1  protein DEPP1

    Conserved Domains (1) summary
    pfam15343
    Location:26 → 207
    DEPP; Decidual protein induced by progesterone family
Nucleotide Protein
Heading Accession and Version

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