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SNX25 sorting nexin 25 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102460524, updated on 2-Jul-2018

Summary

Gene symbol
SNX25
Gene description
sorting nexin 25
See related
Ensembl:ENSPSIG00000015094
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs

Genomic context

See SNX25 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005856643.1 (6300011..6413470, complement)

NW_005856643.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 37 Neighboring gene LRP2-binding protein-like Neighboring gene LRP2 binding protein Neighboring gene cilia and flagella associated protein 97 Neighboring gene solute carrier family 25 member 4

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005856643 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005856643.1 Reference PelSin_1.0 Primary Assembly

    Range
    6300011..6413470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006128484.3XP_006128546.1  sorting nexin-25 isoform X5

    Conserved Domains (4) summary
    pfam02194
    Location:2158
    PXA; PXA domain
    pfam08628
    Location:609715
    Nexin_C; Sorting nexin C terminal
    cl02563
    Location:503565
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl02565
    Location:294401
    RGS; Regulator of G protein signaling (RGS) domain superfamily
  2. XM_006128481.3XP_006128543.1  sorting nexin-25 isoform X2

    Conserved Domains (4) summary
    pfam02194
    Location:2158
    PXA; PXA domain
    pfam08628
    Location:664770
    Nexin_C; Sorting nexin C terminal
    cl02563
    Location:503587
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl02565
    Location:294401
    RGS; Regulator of G protein signaling (RGS) domain superfamily
  3. XM_006128482.3XP_006128544.1  sorting nexin-25 isoform X3

    Conserved Domains (4) summary
    pfam02194
    Location:2158
    PXA; PXA domain
    pfam08628
    Location:647753
    Nexin_C; Sorting nexin C terminal
    cl02563
    Location:503605
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl02565
    Location:294401
    RGS; Regulator of G protein signaling (RGS) domain superfamily
  4. XM_014576245.2XP_014431731.1  sorting nexin-25 isoform X4

    Conserved Domains (4) summary
    cd06878
    Location:448570
    PX_SNX25; The phosphoinositide binding Phox Homology domain of Sorting Nexin 25
    pfam02194
    Location:45103
    PXA; PXA domain
    pfam08628
    Location:647753
    Nexin_C; Sorting nexin C terminal
    cl02565
    Location:239346
    RGS; Regulator of G protein signaling (RGS) domain superfamily
  5. XM_006128479.3XP_006128541.1  sorting nexin-25 isoform X1

    Related
    ENSPSIP00000017051.1, ENSPSIT00000017129.1
    Conserved Domains (4) summary
    cd06878
    Location:503625
    PX_SNX25; The phosphoinositide binding Phox Homology domain of Sorting Nexin 25
    pfam02194
    Location:2158
    PXA; PXA domain
    pfam08628
    Location:702808
    Nexin_C; Sorting nexin C terminal
    cl02565
    Location:294401
    RGS; Regulator of G protein signaling (RGS) domain superfamily

RNA

  1. XR_001368652.2 RNA Sequence

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