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LOC102457193 neuronal PAS domain-containing protein 3-like [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102457193, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102457193
Gene description
neuronal PAS domain-containing protein 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854057.1 (478279..499884)

NW_005854057.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 35 Neighboring gene neuronal PAS domain-containing protein 1-like Neighboring gene NTPase KAP family P-loop domain-containing protein 1-like Neighboring gene transmembrane protein 160

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854057 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854057.1 Reference PelSin_1.0 Primary Assembly

    Range
    478279..499884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025182874.1 → XP_025038659.1  LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3-like

    Conserved Domains (1) summary
    cd00130
    Location:99 → 181
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
Nucleotide Protein
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