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PER1 period circadian regulator 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102450610, updated on 16-Nov-2018

Summary

Gene symbol
PER1
Gene description
period circadian regulator 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See PER1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853187.1 (107649..122346, complement)

NW_005853187.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene hes family bHLH transcription factor 7 Neighboring gene aurora kinase C Neighboring gene vesicle associated membrane protein 2 Neighboring gene U8 small nucleolar RNA

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005853187 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Herpes simplex infection, organism-specific biosystem (from KEGG)
    Herpes simplex infection, organism-specific biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
  • Herpes simplex infection, conserved biosystem (from KEGG)
    Herpes simplex infection, conserved biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...

General protein information

Preferred Names
period circadian protein homolog 1
Names
period circadian clock 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853187.1 Reference PelSin_1.0 Primary Assembly

    Range
    107649..122346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025181282.1XP_025037067.1  period circadian protein homolog 1

    Conserved Domains (2) summary
    pfam08447
    Location:333400
    PAS_3; PAS fold
    pfam12114
    Location:626740
    Period_C; Period protein 2/3C-terminal region
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