Format

Send to:

Choose Destination

DDX58 DExD/H-box helicase 58 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102439039, updated on 16-Nov-2018

Summary

Gene symbol
DDX58
Gene description
DExD/H-box helicase 58
See related
Ensembl:ENSMLUG00000003041
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis
Orthologs

Genomic context

See DDX58 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871294.1 (1700266..1748651)

NW_005871294.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B6 Neighboring gene TOP1 binding arginine/serine rich protein Neighboring gene cathepsin L1-like Neighboring gene cathepsin L1-like Neighboring gene death-associated protein kinase 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005871294 Unplaced Scaffold Reference Myoluc2.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
probable ATP-dependent RNA helicase DDX58

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871294.1 Reference Myoluc2.0

    Range
    1700266..1748651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014464378.2XP_014319864.1  probable ATP-dependent RNA helicase DDX58 isoform X1

    Related
    ENSMLUP00000002767.2, ENSMLUT00000003044.2
    Conserved Domains (7) summary
    COG1111
    Location:239808
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
    cd08817
    Location:100189
    CARD_RIG-I_r2; Caspase activation and recruitment domain found in RIG-I, second repeat
    cd12090
    Location:469607
    MDA5_ID; Insert domain of MDA5
    pfam00270
    Location:244373
    DEAD; DEAD/DEAH box helicase
    pfam00271
    Location:620736
    Helicase_C; Helicase conserved C-terminal domain
    pfam11648
    Location:810925
    RIG-I_C-RD; C-terminal domain of RIG-I
    cl14633
    Location:292
    DD; Death Domain Superfamily of protein-protein interaction domains
  2. XM_014464379.2XP_014319865.1  probable ATP-dependent RNA helicase DDX58 isoform X2

    Conserved Domains (7) summary
    COG1111
    Location:238807
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
    cd08817
    Location:100189
    CARD_RIG-I_r2; Caspase activation and recruitment domain found in RIG-I, second repeat
    cd12090
    Location:468606
    MDA5_ID; Insert domain of MDA5
    pfam00270
    Location:243372
    DEAD; DEAD/DEAH box helicase
    pfam00271
    Location:619735
    Helicase_C; Helicase conserved C-terminal domain
    pfam11648
    Location:809924
    RIG-I_C-RD; C-terminal domain of RIG-I
    cl14633
    Location:292
    DD; Death Domain Superfamily of protein-protein interaction domains
  3. XM_023762488.1XP_023618256.1  probable ATP-dependent RNA helicase DDX58 isoform X3

    Conserved Domains (3) summary
    cd08817
    Location:100189
    CARD_RIG-I_r2; Caspase activation and recruitment domain found in RIG-I, second repeat
    cl14633
    Location:292
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl17041
    Location:239788
    helicase_insert_domain
  4. XM_023762489.1XP_023618257.1  probable ATP-dependent RNA helicase DDX58 isoform X4

    Conserved Domains (3) summary
    cd08817
    Location:100189
    CARD_RIG-I_r2; Caspase activation and recruitment domain found in RIG-I, second repeat
    cl14633
    Location:292
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl17041
    Location:239774
    helicase_insert_domain
Support Center