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LRRFIP1 LRR binding FLII interacting protein 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102396710, updated on 21-Jul-2018

Summary

Gene symbol
LRRFIP1
Gene description
LRR binding FLII interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs

Genomic context

See LRRFIP1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
31
Annotation release Status Assembly Chr Location
101 current ASM312139v1 (GCF_003121395.1) 6 NC_037550.1 (116576758..116738401)
100 previous assembly UMD_CASPUR_WB_2.0 (GCF_000471725.1) Unplaced Scaffold NW_005785221.1 (988207..1080046)

Chromosome 6 - NC_037550.1Genomic Context describing neighboring genes Neighboring gene RAB17, member RAS oncogene family Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene RNA binding motif protein 44 Neighboring gene receptor activity modifying protein 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
leucine-rich repeat flightless-interacting protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM312139v1 Primary Assembly

Genomic

  1. NC_037550.1 Reference ASM312139v1 Primary Assembly

    Range
    116576758..116738401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025289252.1XP_025145037.1  leucine-rich repeat flightless-interacting protein 1 isoform X46

    Conserved Domains (2) summary
    pfam09738
    Location:263554
    LRRFIP; LRRFIP family
    cl25732
    Location:389489
    SMC_N; RecF/RecN/SMC N terminal domain
  2. XM_025289251.1XP_025145036.1  leucine-rich repeat flightless-interacting protein 1 isoform X45

    Conserved Domains (3) summary
    pfam04111
    Location:389473
    APG6; Autophagy protein Apg6
    pfam08614
    Location:595682
    ATG16; Autophagy protein 16 (ATG16)
    pfam09738
    Location:263616
    LRRFIP; LRRFIP family
  3. XM_025289253.1XP_025145038.1  leucine-rich repeat flightless-interacting protein 1 isoform X48

    Conserved Domains (3) summary
    pfam04111
    Location:374458
    APG6; Autophagy protein Apg6
    pfam08614
    Location:580667
    ATG16; Autophagy protein 16 (ATG16)
    pfam09738
    Location:248601
    LRRFIP; LRRFIP family
  4. XM_025289254.1XP_025145039.1  leucine-rich repeat flightless-interacting protein 1 isoform X49

    Conserved Domains (3) summary
    pfam04111
    Location:361445
    APG6; Autophagy protein Apg6
    pfam08614
    Location:567654
    ATG16; Autophagy protein 16 (ATG16)
    pfam09738
    Location:235588
    LRRFIP; LRRFIP family
  5. XM_025289209.1XP_025144994.1  leucine-rich repeat flightless-interacting protein 1 isoform X1

    Conserved Domains (3) summary
    pfam09738
    Location:263492
    LRRFIP; LRRFIP family
    cl25732
    Location:309683
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:523855
    Na_Ca_ex; Sodium/calcium exchanger protein
  6. XM_025289226.1XP_025145011.1  leucine-rich repeat flightless-interacting protein 1 isoform X20

    Conserved Domains (2) summary
    pfam09738
    Location:263476
    LRRFIP; LRRFIP family
    cl27511
    Location:461793
    Na_Ca_ex; Sodium/calcium exchanger protein
  7. XM_025289215.1XP_025145000.1  leucine-rich repeat flightless-interacting protein 1 isoform X8

    Conserved Domains (3) summary
    pfam09738
    Location:263468
    LRRFIP; LRRFIP family
    cl25732
    Location:308659
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:499831
    Na_Ca_ex; Sodium/calcium exchanger protein
  8. XM_025289213.1XP_025144998.1  leucine-rich repeat flightless-interacting protein 1 isoform X6

    Conserved Domains (3) summary
    pfam09738
    Location:241470
    LRRFIP; LRRFIP family
    cl25732
    Location:287661
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:501833
    Na_Ca_ex; Sodium/calcium exchanger protein
  9. XM_025289211.1XP_025144996.1  leucine-rich repeat flightless-interacting protein 1 isoform X4

    Conserved Domains (3) summary
    pfam09738
    Location:248477
    LRRFIP; LRRFIP family
    cl25732
    Location:294668
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:508840
    Na_Ca_ex; Sodium/calcium exchanger protein
  10. XM_025289217.1XP_025145002.1  leucine-rich repeat flightless-interacting protein 1 isoform X9

    Conserved Domains (3) summary
    pfam09738
    Location:237466
    LRRFIP; LRRFIP family
    cl25732
    Location:283657
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:497829
    Na_Ca_ex; Sodium/calcium exchanger protein
  11. XM_025289222.1XP_025145007.1  leucine-rich repeat flightless-interacting protein 1 isoform X16

    Conserved Domains (3) summary
    pfam09738
    Location:215444
    LRRFIP; LRRFIP family
    cl25732
    Location:261635
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:475807
    Na_Ca_ex; Sodium/calcium exchanger protein
  12. XM_025289221.1XP_025145006.1  leucine-rich repeat flightless-interacting protein 1 isoform X14

    Conserved Domains (3) summary
    pfam09738
    Location:222451
    LRRFIP; LRRFIP family
    cl25732
    Location:268642
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:482814
    Na_Ca_ex; Sodium/calcium exchanger protein
  13. XM_025289228.1XP_025145013.1  leucine-rich repeat flightless-interacting protein 1 isoform X22

    Conserved Domains (2) summary
    pfam09738
    Location:200429
    LRRFIP; LRRFIP family
    cl27511
    Location:460792
    Na_Ca_ex; Sodium/calcium exchanger protein
  14. XM_025289237.1XP_025145022.1  leucine-rich repeat flightless-interacting protein 1 isoform X30

    Conserved Domains (2) summary
    pfam09738
    Location:170399
    LRRFIP; LRRFIP family
    cl27511
    Location:430762
    Na_Ca_ex; Sodium/calcium exchanger protein
  15. XM_025289227.1XP_025145012.1  leucine-rich repeat flightless-interacting protein 1 isoform X21

    Conserved Domains (2) summary
    pfam09738
    Location:201430
    LRRFIP; LRRFIP family
    cl27511
    Location:461793
    Na_Ca_ex; Sodium/calcium exchanger protein
  16. XM_025289234.1XP_025145019.1  leucine-rich repeat flightless-interacting protein 1 isoform X28

    Conserved Domains (2) summary
    pfam09738
    Location:179408
    LRRFIP; LRRFIP family
    cl27511
    Location:439771
    Na_Ca_ex; Sodium/calcium exchanger protein
  17. XM_025289241.1XP_025145026.1  leucine-rich repeat flightless-interacting protein 1 isoform X34

    Conserved Domains (2) summary
    pfam09738
    Location:142378
    LRRFIP; LRRFIP family
    cl27511
    Location:409741
    Na_Ca_ex; Sodium/calcium exchanger protein
  18. XM_025289210.1XP_025144995.1  leucine-rich repeat flightless-interacting protein 1 isoform X3

    Conserved Domains (3) summary
    pfam09738
    Location:250479
    LRRFIP; LRRFIP family
    cl25732
    Location:296670
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:510842
    Na_Ca_ex; Sodium/calcium exchanger protein
  19. XM_025289231.1XP_025145016.1  leucine-rich repeat flightless-interacting protein 1 isoform X25

    Conserved Domains (2) summary
    pfam09738
    Location:188417
    LRRFIP; LRRFIP family
    cl27511
    Location:448780
    Na_Ca_ex; Sodium/calcium exchanger protein
  20. XM_025289240.1XP_025145025.1  leucine-rich repeat flightless-interacting protein 1 isoform X33

    Conserved Domains (2) summary
    pfam09738
    Location:166395
    LRRFIP; LRRFIP family
    cl27511
    Location:426758
    Na_Ca_ex; Sodium/calcium exchanger protein
  21. XM_025289219.1XP_025145004.1  leucine-rich repeat flightless-interacting protein 1 isoform X12

    Conserved Domains (3) summary
    pfam09738
    Location:230459
    LRRFIP; LRRFIP family
    cl25732
    Location:276650
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:490822
    Na_Ca_ex; Sodium/calcium exchanger protein
  22. XM_025289225.1XP_025145010.1  leucine-rich repeat flightless-interacting protein 1 isoform X19

    Conserved Domains (2) summary
    pfam09738
    Location:204433
    LRRFIP; LRRFIP family
    cl27511
    Location:464796
    Na_Ca_ex; Sodium/calcium exchanger protein
  23. XM_025289230.1XP_025145015.1  leucine-rich repeat flightless-interacting protein 1 isoform X24

    Conserved Domains (2) summary
    pfam09738
    Location:189418
    LRRFIP; LRRFIP family
    cl27511
    Location:449781
    Na_Ca_ex; Sodium/calcium exchanger protein
  24. XM_025289239.1XP_025145024.1  leucine-rich repeat flightless-interacting protein 1 isoform X32

    Conserved Domains (2) summary
    pfam09738
    Location:167396
    LRRFIP; LRRFIP family
    cl27511
    Location:427759
    Na_Ca_ex; Sodium/calcium exchanger protein
  25. XM_025289232.1XP_025145017.1  leucine-rich repeat flightless-interacting protein 1 isoform X26

    Conserved Domains (2) summary
    pfam09738
    Location:183412
    LRRFIP; LRRFIP family
    cl27511
    Location:443775
    Na_Ca_ex; Sodium/calcium exchanger protein
  26. XM_025289238.1XP_025145023.1  leucine-rich repeat flightless-interacting protein 1 isoform X31

    Conserved Domains (2) summary
    pfam09738
    Location:168397
    LRRFIP; LRRFIP family
    cl27511
    Location:428760
    Na_Ca_ex; Sodium/calcium exchanger protein
  27. XM_025289242.1XP_025145027.1  leucine-rich repeat flightless-interacting protein 1 isoform X35

    Conserved Domains (2) summary
    pfam09738
    Location:146375
    LRRFIP; LRRFIP family
    cl27511
    Location:406738
    Na_Ca_ex; Sodium/calcium exchanger protein
  28. XM_025289212.1XP_025144997.1  leucine-rich repeat flightless-interacting protein 1 isoform X5

    Conserved Domains (3) summary
    pfam09738
    Location:247476
    LRRFIP; LRRFIP family
    cl25732
    Location:293667
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:507839
    Na_Ca_ex; Sodium/calcium exchanger protein
  29. XM_025289218.1XP_025145003.1  leucine-rich repeat flightless-interacting protein 1 isoform X10

    Conserved Domains (3) summary
    pfam09738
    Location:234463
    LRRFIP; LRRFIP family
    cl25732
    Location:280654
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:494826
    Na_Ca_ex; Sodium/calcium exchanger protein
  30. XM_025289214.1XP_025144999.1  leucine-rich repeat flightless-interacting protein 1 isoform X7

    Conserved Domains (3) summary
    pfam09738
    Location:241470
    LRRFIP; LRRFIP family
    cl25732
    Location:287661
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:501833
    Na_Ca_ex; Sodium/calcium exchanger protein
  31. XM_025289243.1XP_025145028.1  leucine-rich repeat flightless-interacting protein 1 isoform X36

    Conserved Domains (2) summary
    pfam09738
    Location:124353
    LRRFIP; LRRFIP family
    cl27511
    Location:384716
    Na_Ca_ex; Sodium/calcium exchanger protein
  32. XM_025289220.1XP_025145005.1  leucine-rich repeat flightless-interacting protein 1 isoform X13

    Conserved Domains (3) summary
    pfam09738
    Location:226455
    LRRFIP; LRRFIP family
    cl25732
    Location:272646
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:486818
    Na_Ca_ex; Sodium/calcium exchanger protein
  33. XM_025289223.1XP_025145008.1  leucine-rich repeat flightless-interacting protein 1 isoform X17

    Conserved Domains (3) summary
    pfam09738
    Location:213442
    LRRFIP; LRRFIP family
    cl25732
    Location:259633
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:473805
    Na_Ca_ex; Sodium/calcium exchanger protein
  34. XM_025289229.1XP_025145014.1  leucine-rich repeat flightless-interacting protein 1 isoform X23

    Conserved Domains (3) summary
    pfam09738
    Location:193422
    LRRFIP; LRRFIP family
    cl25732
    Location:239613
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:453785
    Na_Ca_ex; Sodium/calcium exchanger protein
  35. XM_025289244.1XP_025145029.1  leucine-rich repeat flightless-interacting protein 1 isoform X37

    Conserved Domains (2) summary
    pfam09738
    Location:52345
    LRRFIP; LRRFIP family
    cl27511
    Location:376708
    Na_Ca_ex; Sodium/calcium exchanger protein
  36. XM_025289245.1XP_025145030.1  leucine-rich repeat flightless-interacting protein 1 isoform X38

    Conserved Domains (2) summary
    pfam09738
    Location:52338
    LRRFIP; LRRFIP family
    cl27511
    Location:369701
    Na_Ca_ex; Sodium/calcium exchanger protein
  37. XM_025289246.1XP_025145031.1  leucine-rich repeat flightless-interacting protein 1 isoform X39

    Conserved Domains (2) summary
    pfam09738
    Location:52308
    LRRFIP; LRRFIP family
    cl27511
    Location:339671
    Na_Ca_ex; Sodium/calcium exchanger protein
  38. XM_025289247.1XP_025145032.1  leucine-rich repeat flightless-interacting protein 1 isoform X40

    Conserved Domains (2) summary
    pfam09738
    Location:52291
    LRRFIP; LRRFIP family
    cl27511
    Location:322654
    Na_Ca_ex; Sodium/calcium exchanger protein
  39. XM_025289248.1XP_025145033.1  leucine-rich repeat flightless-interacting protein 1 isoform X42

    Conserved Domains (2) summary
    pfam09738
    Location:52268
    LRRFIP; LRRFIP family
    cl27511
    Location:253585
    Na_Ca_ex; Sodium/calcium exchanger protein
  40. XM_025289249.1XP_025145034.1  leucine-rich repeat flightless-interacting protein 1 isoform X43

    Conserved Domains (2) summary
    pfam09738
    Location:52251
    LRRFIP; LRRFIP family
    cl27511
    Location:236568
    Na_Ca_ex; Sodium/calcium exchanger protein
  41. XM_025289236.1XP_025145021.1  leucine-rich repeat flightless-interacting protein 1 isoform X29

    Conserved Domains (3) summary
    pfam09738
    Location:175404
    LRRFIP; LRRFIP family
    cl25732
    Location:221595
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:435767
    Na_Ca_ex; Sodium/calcium exchanger protein
  42. XM_006066755.2XP_006066817.1  leucine-rich repeat flightless-interacting protein 1 isoform X47

    Conserved Domains (1) summary
    pfam09738
    Location:42318
    DUF2051; Double stranded RNA binding protein (DUF2051)
  43. XM_006066728.2XP_006066790.2  leucine-rich repeat flightless-interacting protein 1 isoform X2

    Conserved Domains (3) summary
    pfam09738
    Location:253482
    LRRFIP; LRRFIP family
    cl25732
    Location:299673
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:513845
    Na_Ca_ex; Sodium/calcium exchanger protein
  44. XM_006066732.2XP_006066794.2  leucine-rich repeat flightless-interacting protein 1 isoform X11

    Conserved Domains (3) summary
    pfam09738
    Location:231460
    LRRFIP; LRRFIP family
    cl25732
    Location:277651
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:491823
    Na_Ca_ex; Sodium/calcium exchanger protein
  45. XM_006066735.2XP_006066797.2  leucine-rich repeat flightless-interacting protein 1 isoform X15

    Conserved Domains (3) summary
    pfam09738
    Location:216445
    LRRFIP; LRRFIP family
    cl25732
    Location:262636
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:476808
    Na_Ca_ex; Sodium/calcium exchanger protein
  46. XM_006066749.2XP_006066811.2  leucine-rich repeat flightless-interacting protein 1 isoform X41

    Conserved Domains (2) summary
    pfam09738
    Location:42281
    LRRFIP; LRRFIP family
    cl27511
    Location:312644
    Na_Ca_ex; Sodium/calcium exchanger protein
  47. XM_025289250.1XP_025145035.1  leucine-rich repeat flightless-interacting protein 1 isoform X44

    Conserved Domains (2) summary
    pfam09738
    Location:42241
    LRRFIP; LRRFIP family
    cl27511
    Location:226558
    Na_Ca_ex; Sodium/calcium exchanger protein
  48. XM_025289235.1XP_025145020.1  leucine-rich repeat flightless-interacting protein 1 isoform X29

    Conserved Domains (3) summary
    pfam09738
    Location:175404
    LRRFIP; LRRFIP family
    cl25732
    Location:221595
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:435767
    Na_Ca_ex; Sodium/calcium exchanger protein
  49. XM_025289224.1XP_025145009.1  leucine-rich repeat flightless-interacting protein 1 isoform X18

    Conserved Domains (3) summary
    pfam09738
    Location:210439
    LRRFIP; LRRFIP family
    cl25732
    Location:256630
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:470802
    Na_Ca_ex; Sodium/calcium exchanger protein
  50. XM_025289233.1XP_025145018.1  leucine-rich repeat flightless-interacting protein 1 isoform X27

    Conserved Domains (3) summary
    pfam09738
    Location:181410
    LRRFIP; LRRFIP family
    cl25732
    Location:227601
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27511
    Location:441773
    Na_Ca_ex; Sodium/calcium exchanger protein
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