Format

Send to:

Choose Destination

CYLD CYLD lysine 63 deubiquitinase [ Bubalus bubalis (water buffalo) ]

Gene ID: 102392021, updated on 21-Jul-2018

Summary

Gene symbol
CYLD
Gene description
CYLD lysine 63 deubiquitinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs

Genomic context

See CYLD in Genome Data Viewer
Location:
chromosome: 18
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM312139v1 (GCF_003121395.1) 18 NC_037562.1 (18728523..18800370)
100 previous assembly UMD_CASPUR_WB_2.0 (GCF_000471725.1) Unplaced Scaffold NW_005783333.1 (164758..236962)

Chromosome 18 - NC_037562.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 20 Neighboring gene nucleotide binding oligomerization domain containing 2 Neighboring gene uncharacterized LOC102396667 Neighboring gene spalt like transcription factor 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ubiquitin carboxyl-terminal hydrolase CYLD

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM312139v1 Primary Assembly

Genomic

  1. NC_037562.1 Reference ASM312139v1 Primary Assembly

    Range
    18728523..18800370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006043270.2XP_006043332.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_006043332.1

    Conserved Domains (3) summary
    smart01052
    Location:469537
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:590945
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304468
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  2. XM_006043271.2XP_006043333.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_006043333.1

    Conserved Domains (3) summary
    smart01052
    Location:469537
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:590945
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304468
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  3. XM_025268650.1XP_025124435.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    Conserved Domains (3) summary
    smart01052
    Location:469537
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:590945
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304468
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  4. XM_006043268.2XP_006043330.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_006043330.1

    Conserved Domains (3) summary
    smart01052
    Location:469537
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:590945
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304468
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  5. XM_025268651.1XP_025124436.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X2

    Conserved Domains (3) summary
    smart01052
    Location:430498
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:551906
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304429
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  6. XM_025268652.1XP_025124437.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X3

    Conserved Domains (3) summary
    smart01052
    Location:397465
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:518873
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:305396
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  7. XM_025268649.1XP_025124434.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    Conserved Domains (3) summary
    smart01052
    Location:469537
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:590945
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304468
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
Support Center