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RASSF1 Ras association domain family member 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102390843, updated on 10-Mar-2024

Summary

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Gene symbol
RASSF1
Gene description
Ras association domain family member 1
See related
EnsemblRapid:ENSBALG00030033131
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 21 NC_059177.1 (49906860..49915896)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 21 NC_058363.1 (49610415..49619451)

Chromosome 21 - NC_059177.1Genomic Context describing neighboring genes Neighboring gene NPR2 like, GATOR1 complex subunit Neighboring gene zinc finger MYND-type containing 10 Neighboring gene tumor suppressor 2, mitochondrial calcium regulator Neighboring gene hyaluronidase 2 Neighboring gene hyaluronidase 1 Neighboring gene hyaluronidase 3 Neighboring gene N-alpha-acetyltransferase 80, NatH catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras association domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059177.1 Reference NDDB_SH_1 Primary Assembly

    Range
    49906860..49915896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006053311.4 → XP_006053373.1  ras association domain-containing protein 1 isoform X2

    See identical proteins and their annotated locations for XP_006053373.1

    Related
    ENSBALP00030061043.1, ENSBALT00030091673.1
    Conserved Domains (3) summary
    cd17218
    Location:130 → 286
    RA_RASSF1; Ras-associating (RA) domain found in Ras-association domain-containing protein 1 (RASSF1)
    pfam16517
    Location:296 → 334
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
    cd20885
    Location:49 → 102
    C1_RASSF1; protein kinase C conserved region 1 (C1 domain) found in Ras association domain-containing protein 1 (RASSF1) and similar proteins

  2. XM_006053310.4 → XP_006053372.1  ras association domain-containing protein 1 isoform X1

    Related
    ENSBALP00030061038.1, ENSBALT00030091665.1
    Conserved Domains (2) summary
    cd01778
    Location:224 → 319
    RASSF1_RA; Ubiquitin-like domain of RASSF1 tumour supproessor protein
    pfam16517
    Location:325 → 364
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
Nucleotide Protein
Heading Accession and Version

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