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ACOD1 aconitate decarboxylase 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102389732, updated on 10-Mar-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
EnsemblRapid:ENSBALG00030010852
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 13 NC_059169.1 (37698585..37705991, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 13 NC_058355.1 (38629885..38637291, complement)

Chromosome 13 - NC_059169.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 3 Neighboring gene CLN5 intracellular trafficking protein Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene uncharacterized LOC112578433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059169.1 Reference NDDB_SH_1 Primary Assembly

    Range
    37698585..37705991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025262741.3 → XP_025118526.1  cis-aconitate decarboxylase isoform X2

    Related
    ENSBALP00030020593.1, ENSBALT00030030329.1
    Conserved Domains (1) summary
    pfam03972
    Location:8 → 419
    MmgE_PrpD; MmgE/PrpD family

  2. XM_006054106.4 → XP_006054168.1  cis-aconitate decarboxylase isoform X1

    Related
    ENSBALP00030020581.1, ENSBALT00030030314.1
    Conserved Domains (1) summary
    pfam03972
    Location:8 → 449
    MmgE_PrpD; MmgE/PrpD family

  3. XM_006054107.4 → XP_006054169.1  cis-aconitate decarboxylase isoform X3

    Conserved Domains (1) summary
    pfam03972
    Location:11 → 395
    MmgE_PrpD; MmgE/PrpD family

  4. XM_044927219.2 → XP_044783154.1  cis-aconitate decarboxylase isoform X4

    Conserved Domains (1) summary
    cl00912
    Location:5 → 376
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

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