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jdp2a Jun dimerization protein 2a [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102222763, updated on 10-Mar-2024

Summary

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Gene symbol
jdp2a
Gene description
Jun dimerization protein 2a
See related
Ensembl:ENSXMAG00000014805
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
jdp2
Orthologs
zebrafish all
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Genomic context

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See jdp2a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 19 NC_036461.1 (8846500..8852916)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372198.1 (1130035..1135402, complement)

Chromosome 19 - NC_036461.1Genomic Context describing neighboring genes Neighboring gene acylphosphatase 1, erythrocyte (common) type Neighboring gene mutL homolog 3 (E. coli) Neighboring gene v-fos FBJ murine osteosarcoma viral oncogene homolog Aa Neighboring gene FLVCR choline and putative heme transporter 2a Neighboring gene ergosterol biosynthesis 28 homolog Neighboring gene tubulin tyrosine ligase-like family, member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jun dimerization protein 2
Names
Jun dimerization protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036461.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    8846500..8852916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005797692.2 → XP_005797749.1  jun dimerization protein 2

    UniProtKB/TrEMBL
    M4AK33
    Related
    ENSXMAP00000014827.1, ENSXMAT00000014847.2
    Conserved Domains (1) summary
    cd14722
    Location:117 → 170
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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