Format

Send to:

Choose Destination

grin2b glutamate ionotropic receptor NMDA type subunit 2B [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102219598, updated on 15-Oct-2018

Summary

Gene symbol
grin2b
Gene description
glutamate ionotropic receptor NMDA type subunit 2B
See related
Ensembl:ENSXMAG00000006209
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs

Genomic context

See grin2b in Genome Data Viewer
Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 16 NC_036458.1 (19867708..20038630)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372520.1 (87969..251360)

Chromosome 16 - NC_036458.1Genomic Context describing neighboring genes Neighboring gene heme binding protein 1 Neighboring gene formation of mitochondrial complex V assembly factor 1 homolog Neighboring gene transcription factor 20 Neighboring gene peripheral myelin protein 22 Neighboring gene germ cell associated 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General protein information

Preferred Names
glutamate receptor ionotropic, NMDA 2B

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036458.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    19867708..20038630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005810901.3XP_005810958.1  glutamate receptor ionotropic, NMDA 2B isoform X1

    See identical proteins and their annotated locations for XP_005810958.1

    UniProtKB/TrEMBL
    M3ZVJ8
    Related
    ENSXMAP00000029274.1, ENSXMAT00000029650.1
    Conserved Domains (5) summary
    cd06378
    Location:119480
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:492892
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:646918
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:150452
    ANF_receptor; Receptor family ligand binding region
    pfam10565
    Location:9291709
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
  2. XM_005810900.2XP_005810957.1  glutamate receptor ionotropic, NMDA 2B isoform X1

    See identical proteins and their annotated locations for XP_005810957.1

    UniProtKB/TrEMBL
    M3ZVJ8
    Related
    ENSXMAP00000006242.1, ENSXMAT00000006249.2
    Conserved Domains (5) summary
    cd06378
    Location:119480
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:492892
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:646918
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:150452
    ANF_receptor; Receptor family ligand binding region
    pfam10565
    Location:9291709
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
  3. XM_023348900.1XP_023204668.1  glutamate receptor ionotropic, NMDA 2B isoform X2

    Conserved Domains (3) summary
    cd06378
    Location:1255
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:267667
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:7041484
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
Support Center