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afap1 actin filament associated protein 1 [ Pundamilia nyererei ]

Gene ID: 102207290, updated on 15-Oct-2018

Summary

Gene symbol
afap1
Gene description
actin filament associated protein 1
See related
Ensembl:ENSPNYG00000001918
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs

Genomic context

See afap1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187812.1 (1254..101334, complement)

NW_005187812.1Genomic Context describing neighboring genes Neighboring gene actin binding LIM protein family member 2 Neighboring gene nuclear factor 7, ovary-like Neighboring gene zinc finger CCHC-type containing 4

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005187812.1 Unplaced Scaffold Reference PunNye1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
actin filament-associated protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187812.1 Reference PunNye1.0

    Range
    1254..101334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005753182.1XP_005753239.1  actin filament-associated protein 1 isoform X3

    Conserved Domains (3) summary
    cd13306
    Location:147252
    PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
    cd13307
    Location:347446
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam00169
    Location:163252
    PH; PH domain
  2. XM_005753181.1XP_005753238.1  actin filament-associated protein 1 isoform X2

    Conserved Domains (3) summary
    cd13306
    Location:151256
    PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
    cd13307
    Location:350449
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam00169
    Location:167256
    PH; PH domain
  3. XM_005753180.1XP_005753237.1  actin filament-associated protein 1 isoform X1

    Related
    ENSPNYP00000002410.1, ENSPNYT00000002473.1
    Conserved Domains (3) summary
    cd13306
    Location:151256
    PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
    cd13307
    Location:351450
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam00169
    Location:167256
    PH; PH domain
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