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cyld CYLD lysine 63 deubiquitinase [ Pundamilia nyererei ]

Gene ID: 102204079, updated on 15-Oct-2018

Summary

Gene symbol
cyld
Gene description
CYLD lysine 63 deubiquitinase
See related
Ensembl:ENSPNYG00000010780
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs

Genomic context

See cyld in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187426.1 (3075700..3097956)

NW_005187426.1Genomic Context describing neighboring genes Neighboring gene naked cuticle homolog 1 Neighboring gene nucleotide binding oligomerization domain containing 2 Neighboring gene spalt like transcription factor 1 Neighboring gene uncharacterized LOC102205221

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005187426.1 Unplaced Scaffold Reference PunNye1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ubiquitin carboxyl-terminal hydrolase CYLD

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187426.1 Reference PunNye1.0

    Range
    3075700..3097956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005727631.1XP_005727688.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_005727688.1

    Conserved Domains (3) summary
    smart01052
    Location:472540
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:593948
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:303448
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  2. XM_005727630.1XP_005727687.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_005727687.1

    Conserved Domains (3) summary
    smart01052
    Location:472540
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:593948
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:303448
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  3. XM_005727633.1XP_005727690.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X3

    See identical proteins and their annotated locations for XP_005727690.1

    Related
    ENSPNYP00000014264.1, ENSPNYT00000014622.1
    Conserved Domains (3) summary
    smart01052
    Location:399467
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:520875
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:304375
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  4. XM_005727632.1XP_005727689.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X2

    See identical proteins and their annotated locations for XP_005727689.1

    Related
    ENSPNYP00000014246.1, ENSPNYT00000014604.1
    Conserved Domains (3) summary
    smart01052
    Location:433501
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:554909
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:303409
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
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