U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EPAS1 endothelial PAS domain protein 1 [ Capra hircus (goat) ]

Gene ID: 102180230, updated on 29-Jan-2025
Gene symbol
EPAS1
Gene description
endothelial PAS domain protein 1
See related
Ensembl:ENSCHIG00000016866
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See EPAS1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 11 NC_030818.1 (28318780..28411296)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 11 NC_022303.1 (28271178..28313427)

Chromosome 11 - NC_030818.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP1A pseudogene Neighboring gene S1 RNA binding domain 1 Neighboring gene protein kinase C epsilon Neighboring gene uncharacterized LOC108637140 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transmembrane protein 247 Neighboring gene ATPase H+ transporting V1 subunit E2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
endothelial PAS domain-containing protein 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030818.1 Reference ASM170441v1 Primary Assembly

    Range
    28318780..28411296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018055188.1 → XP_017910677.1  endothelial PAS domain-containing protein 1

    UniProtKB/TrEMBL
    A0A452EXI7, A0A452EXX3
    Related
    ENSCHIP00000016771.1, ENSCHIT00000024579.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases