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PDX1 pancreatic and duodenal homeobox 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102140063, updated on 19-May-2025
Gene symbol
PDX1
Gene description
pancreatic and duodenal homeobox 1
See related
Ensembl:ENSMFAG00000045682
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
all
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See PDX1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2025_03 current T2T-MFA8v1.1 (GCF_037993035.2) 17 NC_088391.1 (7858550..7864441)

Chromosome 17 - NC_088391.1Genomic Context describing neighboring genes Neighboring gene GS homeobox 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC135968076 Neighboring gene caudal type homeobox 2

Genomic Sequence:
NC_088391.1 Chromosome 17 Reference T2T-MFA8v1.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in type B pancreatic cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
pancreas/duodenum homeobox protein 1

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RefSeqs of Annotated Genomes: GCF_037993035.2-RS_2025_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.1

Genomic

  1. NC_088391.1 Reference T2T-MFA8v1.1

    Range
    7858550..7864441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005585535.4 → XP_005585592.2  pancreas/duodenum homeobox protein 1

    UniProtKB/TrEMBL
    A0A7N9D2Z5
    Conserved Domains (1) summary
    pfam00046
    Location:149 → 203
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases