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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001318875.2 → NP_001305804.1 flotillin-1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AF117234, AK301291, HY101236
- UniProtKB/Swiss-Prot
-
O75955
- Conserved Domains (2) summary
-
- cd03399
Location:30 → 127
- SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
- cl19107
Location:193 → 299
- SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
-
NM_005803.4 → NP_005794.1 flotillin-1 isoform 1
See identical proteins and their annotated locations for NP_005794.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AF089750, AF117234, HY101236
- Consensus CDS
-
CCDS4688.1
- UniProtKB/Swiss-Prot
- O75955, Q9UNV8
- UniProtKB/TrEMBL
-
Q5ST80
- Related
- ENSP00000365569.3, ENST00000376389.8
- Conserved Domains (2) summary
-
- cd03399
Location:30 → 175
- SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
- cl25773
Location:4 → 419
- Flot; Flotillin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
30727709..30742687 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006714947.4 → XP_006715010.1 flotillin-1 isoform X4
See identical proteins and their annotated locations for XP_006715010.1
- Conserved Domains (3) summary
-
- smart00244
Location:31 → 213
- PHB; prohibitin homologues
- cd03399
Location:18 → 122
- SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
- cl19107
Location:188 → 294
- SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
-
XM_017010158.2 → XP_016865647.1 flotillin-1 isoform X3
-
XM_047418064.1 → XP_047274020.1 flotillin-1 isoform X4
-
XM_017010157.2 → XP_016865646.1 flotillin-1 isoform X2
-
XM_005248780.4 → XP_005248837.1 flotillin-1 isoform X1
See identical proteins and their annotated locations for XP_005248837.1
- UniProtKB/Swiss-Prot
- O75955, Q9UNV8
- UniProtKB/TrEMBL
-
Q5ST80
- Conserved Domains (2) summary
-
- cd03399
Location:30 → 175
- SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
- cl25773
Location:4 → 419
- Flot; Flotillin
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_167244.2 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
2057212..2060006 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_2
Genomic
-
NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2
- Range
-
2207446..2222427 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_3
Genomic
-
NT_167245.2 Reference GRCh38.p14 ALT_REF_LOCI_3
- Range
-
1983559..1998538 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_4
Genomic
-
NT_167246.2 Reference GRCh38.p14 ALT_REF_LOCI_4
- Range
-
2037960..2052938 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_5
Genomic
-
NT_167247.2 Reference GRCh38.p14 ALT_REF_LOCI_5
- Range
-
2071784..2085411 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_6
Genomic
-
NT_167248.2 Reference GRCh38.p14 ALT_REF_LOCI_6
- Range
-
1982822..1997797 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_7
Genomic
-
NT_167249.2 Reference GRCh38.p14 ALT_REF_LOCI_7
- Range
-
2028495..2043483 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
30591911..30606890 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)