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TBX5 T-box transcription factor 5 [ Columba livia (rock pigeon) ]

Gene ID: 102085966, updated on 30-Aug-2022

Summary

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Gene symbol
TBX5
Gene description
T-box transcription factor 5
Locus tag
A306_13648
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See TBX5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973225.1 (647132..688842, complement)

NW_004973225.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110357229 Neighboring gene uncharacterized LOC110357228 Neighboring gene uncharacterized LOC110357230 Neighboring gene uncharacterized LOC110357214 Neighboring gene uncharacterized LOC110357213 Neighboring gene uncharacterized LOC110357215

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973225 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
T-box transcription factor TBX5
Names
T-box 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973225.1 Reference Cliv_1.0 Primary Assembly

    Range
    647132..688842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005500160.3 → XP_005500217.1  T-box transcription factor TBX5 isoform X1

    See identical proteins and their annotated locations for XP_005500217.1

    UniProtKB/TrEMBL
    A0A2I0LZ14
    Conserved Domains (1) summary
    cd00182
    Location:53 → 241
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...

  2. XM_021284483.1 → XP_021140158.1  T-box transcription factor TBX5 isoform X2

    Conserved Domains (1) summary
    cd00182
    Location:3 → 191
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
Nucleotide Protein
Heading Accession and Version

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