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Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102025015, updated on 10-Mar-2024

Summary

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Gene symbol
Acap3
Gene description
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
See related
Ensembl:ENSCLAG00000007949
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955486.1 (9495087..9508047)

NW_004955486.1Genomic Context describing neighboring genes Neighboring gene ceramide-1-phosphate transfer protein Neighboring gene integrator complex subunit 11 Neighboring gene pseudouridine synthase like 1 Neighboring gene sodium channel epithelial 1 subunit delta Neighboring gene ubiquitin conjugating enzyme E2 J2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955486.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955486.1 Reference ChiLan1.0 Primary Assembly

    Range
    9495087..9508047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005404234.2 → XP_005404291.1  arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2V7Q1, A0A8C2V7Z0
    Related
    ENSCLAP00000011530.1, ENSCLAT00000011667.1
    Conserved Domains (7) summary
    cd07637
    Location:16 → 215
    BAR_ACAP3; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 3
    cd00204
    Location:671 → 786
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd13250
    Location:271 → 367
    PH_ACAP; ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain
    pfam00169
    Location:269 → 363
    PH; PH domain
    pfam01412
    Location:403 → 521
    ArfGap; Putative GTPase activating protein for Arf
    pfam12796
    Location:671 → 764
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:700 → 731
    ANK; ANK repeat [structural motif]

  2. XM_005404235.2 → XP_005404292.1  arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2V7Z0
    Conserved Domains (7) summary
    cd07637
    Location:16 → 215
    BAR_ACAP3; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 3
    cd00204
    Location:670 → 785
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd13250
    Location:271 → 367
    PH_ACAP; ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain
    pfam00169
    Location:269 → 363
    PH; PH domain
    pfam01412
    Location:403 → 521
    ArfGap; Putative GTPase activating protein for Arf
    pfam12796
    Location:670 → 763
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:699 → 730
    ANK; ANK repeat [structural motif]

  3. XM_013504190.1 → XP_013359644.1  arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C2V7Z0
    Conserved Domains (7) summary
    cd00204
    Location:629 → 744
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd13250
    Location:229 → 325
    PH_ACAP; ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain
    pfam00169
    Location:227 → 321
    PH; PH domain
    pfam01412
    Location:361 → 479
    ArfGap; Putative GTPase activating protein for Arf
    pfam12796
    Location:629 → 722
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:658 → 689
    ANK; ANK repeat [structural motif]
    cl12013
    Location:1 → 173
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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