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Il6r interleukin 6 receptor [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102022428, updated on 10-Mar-2024

Summary

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Gene symbol
Il6r
Gene description
interleukin 6 receptor
See related
Ensembl:ENSCLAG00000004093
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955545.1 (932814..979359)

NW_004955545.1Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 8B2 Neighboring gene 60S ribosomal protein L35 pseudogene Neighboring gene RAC-beta serine/threonine-protein kinase pseudogene Neighboring gene Src homology 2 domain containing E Neighboring gene ubiquitin conjugating enzyme E2 Q1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955545.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-6 receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955545.1 Reference ChiLan1.0 Primary Assembly

    Range
    932814..979359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013508348.1 → XP_013363802.1  interleukin-6 receptor subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8C2UV74
    Conserved Domains (4) summary
    smart00408
    Location:36 → 93
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:30 → 91
    IG_like; Immunoglobulin like
    cd00063
    Location:208 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl21522
    Location:110 → 205
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_013508349.1 → XP_013363803.1  interleukin-6 receptor subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A8C2UV74
    Related
    ENSCLAP00000005772.1, ENSCLAT00000005873.1
    Conserved Domains (4) summary
    smart00408
    Location:36 → 93
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:30 → 91
    IG_like; Immunoglobulin like
    cd00063
    Location:208 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl21522
    Location:110 → 205
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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