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Baz2a bromodomain adjacent to zinc finger domain 2A [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102011959, updated on 29-Aug-2018

Summary

Gene symbol
Baz2a
Gene description
bromodomain adjacent to zinc finger domain 2A
See related
Ensembl:ENSCLAG00000010711
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs

Genomic context

See Baz2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955458.1 (4149610..4186647, complement)

NW_004955458.1Genomic Context describing neighboring genes Neighboring gene glutaminase 2 Neighboring gene RNA binding motif single stranded interacting protein 2 Neighboring gene uncharacterized LOC106149952 Neighboring gene ATP synthase F1 subunit beta Neighboring gene prostaglandin E synthase 3

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004955458.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
bromodomain adjacent to zinc finger domain protein 2A

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955458.1 Reference ChiLan1.0 Primary Assembly

    Range
    4149610..4186647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013520868.1XP_013376322.1  bromodomain adjacent to zinc finger domain protein 2A isoform X4

    Conserved Domains (5) summary
    cd05503
    Location:18031899
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:823885
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:537609
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16831729
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14441482
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  2. XM_005397322.2XP_005397379.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

    Conserved Domains (5) summary
    cd05503
    Location:18151911
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:836898
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:537609
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16961742
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14571495
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  3. XM_005397321.2XP_005397378.1  bromodomain adjacent to zinc finger domain protein 2A isoform X1

    Conserved Domains (5) summary
    cd05503
    Location:18161912
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:836898
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:537609
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16961742
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14571495
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  4. XM_005397324.2XP_005397381.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    See identical proteins and their annotated locations for XP_005397381.1

    Conserved Domains (5) summary
    cd05503
    Location:18141910
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:834896
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:535607
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16941740
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14551493
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  5. XM_013520867.1XP_013376321.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    Related
    ENSCLAP00000015583.1, ENSCLAT00000015745.1
    Conserved Domains (5) summary
    cd05503
    Location:18141910
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:834896
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:535607
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16941740
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14551493
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
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