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Ncbp1 nuclear cap binding protein subunit 1 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101996338, updated on 10-Aug-2020

Summary

Gene symbol
Ncbp1
Gene description
nuclear cap binding protein subunit 1
See related
Ensembl:ENSMOCG00000015818
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
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Genomic context

See Ncbp1 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
23
Annotation release Status Assembly LG Location
102 current MicOch1.0 (GCF_000317375.1) LG5 NC_022031.1 (41228885..41265396)

Linkage Group LG5 - NC_022031.1Genomic Context describing neighboring genes Neighboring gene tropomodulin 1 Neighboring gene thiosulfate sulfurtransferase like domain containing 2 Neighboring gene XPA, DNA damage recognition and repair factor Neighboring gene uncharacterized LOC113457745

Genomic regions, transcripts, and products

Genomic Sequence:
NC_022031.1 Chromosome LG5 Reference MicOch1.0

General protein information

Preferred Names
nuclear cap-binding protein subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022031.1 Reference MicOch1.0

    Range
    41228885..41265396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005362135.2XP_005362192.1  nuclear cap-binding protein subunit 1 isoform X1

    Related
    ENSMOCP00000017134.1, ENSMOCT00000020920.1
    Conserved Domains (3) summary
    smart00543
    Location:28240
    MIF4G; Middle domain of eukaryotic initiation factor 4G (eIF4G)
    pfam09088
    Location:351470
    MIF4G_like; MIF4G like
    pfam09090
    Location:491754
    MIF4G_like_2; MIF4G like
  2. XM_026786598.1XP_026642399.1  nuclear cap-binding protein subunit 1 isoform X2

    Conserved Domains (3) summary
    smart00543
    Location:1133
    MIF4G; Middle domain of eukaryotic initiation factor 4G (eIF4G)
    pfam09088
    Location:244363
    MIF4G_like; MIF4G like
    pfam09090
    Location:378652
    MIF4G_like_2; MIF4G like
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