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Ddx58 DExD/H-box helicase 58 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101992617, updated on 21-Oct-2018

Summary

Gene symbol
Ddx58
Gene description
DExD/H-box helicase 58
See related
Ensembl:ENSMOCG00000006173
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs

Genomic context

See Ddx58 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
15
Annotation release Status Assembly LG Location
102 current MicOch1.0 (GCF_000317375.1) LG5 NC_022031.1 (36488887..36529668, complement)

Linkage Group LG5 - NC_022031.1Genomic Context describing neighboring genes Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene aconitase 1 Neighboring gene small integral membrane protein 27 Neighboring gene TOP1 binding arginine/serine rich protein Neighboring gene NADH:ubiquinone oxidoreductase subunit B6

Genomic regions, transcripts, and products

Genomic Sequence:
NC_022031.1 Chromosome LG5 Reference MicOch1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
probable ATP-dependent RNA helicase DDX58

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022031.1 Reference MicOch1.0

    Range
    36488887..36529668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005362367.3XP_005362424.1  probable ATP-dependent RNA helicase DDX58

    Related
    ENSMOCP00000006533.1, ENSMOCT00000008040.1
    Conserved Domains (5) summary
    cd00046
    Location:123255
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd15805
    Location:650763
    RIG-I_C; C-terminal domain of Retinoic acid-inducible gene (RIG)-I protein, a cytoplasmic viral RNA receptor
    cd12090
    Location:314449
    MDA5_ID; Insert domain of MDA5
    pfam00271
    Location:458578
    Helicase_C; Helicase conserved C-terminal domain
    cl14633
    Location:292
    DD; Death Domain Superfamily of protein-protein interaction domains
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