U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Nckap1 NCK associated protein 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101976725, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Nckap1
Gene description
NCK associated protein 1
Locus tag
H1C71_020383
See related
EnsemblRapid:ENSSTOG00015008716
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405303.1 (142971863..143070930, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936509.1 (11525764..11624833, complement)

NW_024405303.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C10 Neighboring gene frizzled related protein Neighboring gene uncharacterized LOC120893074 Neighboring gene uncharacterized LOC120893073 Neighboring gene dual specificity phosphatase 19

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell projection assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortical actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCAR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nck-associated protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405303.1 Reference HiC_Itri_2 Primary Assembly

    Range
    142971863..143070930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021725978.2 → XP_021581653.1  nck-associated protein 1 isoform X1

    Related
    ENSSTOP00015010796.1, ENSSTOT00015011854.1
    Conserved Domains (1) summary
    pfam09735
    Location:13 → 1128
    Nckap1; Membrane-associated apoptosis protein

  2. XM_005324684.2 → XP_005324741.1  nck-associated protein 1 isoform X3

    See identical proteins and their annotated locations for XP_005324741.1

    Related
    ENSSTOP00015010800.1, ENSSTOT00015011858.1
    Conserved Domains (1) summary
    pfam09735
    Location:13 → 1122
    Nckap1; Membrane-associated apoptosis protein

  3. XM_013358297.3 → XP_013213751.1  nck-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    I3LX66
    Conserved Domains (1) summary
    pfam09735
    Location:13 → 1120
    Nckap1; Membrane-associated apoptosis protein

  4. XM_021725979.2 → XP_021581654.1  nck-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    I3NA27
    Conserved Domains (1) summary
    pfam09735
    Location:13 → 1126
    Nckap1; Membrane-associated apoptosis protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.