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Flcn folliculin [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101962447, updated on 8-Mar-2024

Summary

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Gene symbol
Flcn
Gene description
folliculin
Locus tag
H1C71_023143
See related
EnsemblRapid:ENSSTOG00015019284
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405602.1 (61965873..61986098)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936741.1 (881150..901296, complement)

NW_024405602.1Genomic Context describing neighboring genes Neighboring gene 5',3'-nucleotidase, mitochondrial Neighboring gene uncharacterized LOC120884251 Neighboring gene COP9 signalosome subunit 3 Neighboring gene phospholipase D family member 6 Neighboring gene myosin phosphatase Rho interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
folliculin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405602.1 Reference HiC_Itri_2 Primary Assembly

    Range
    61965873..61986098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013364815.3 → XP_013220269.1  folliculin

    UniProtKB/TrEMBL
    I3MJ54
    Related
    ENSSTOP00015023786.1, ENSSTOT00015025903.1
    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:345 → 566
    Folliculin_C; Folliculin C-terminal domain

  2. XM_005339446.4 → XP_005339503.1  folliculin

    UniProtKB/TrEMBL
    I3MJ54
    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:345 → 566
    Folliculin_C; Folliculin C-terminal domain

  3. XM_021736027.2 → XP_021591702.1  folliculin

    UniProtKB/TrEMBL
    I3MJ54
    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:345 → 566
    Folliculin_C; Folliculin C-terminal domain
Nucleotide Protein
Heading Accession and Version

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