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Aasdh aminoadipate-semialdehyde dehydrogenase [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101960536, updated on 8-Mar-2024

Summary

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Gene symbol
Aasdh
Gene description
aminoadipate-semialdehyde dehydrogenase
See related
EnsemblRapid:ENSSTOG00015005492
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405285.1 (27707855..27739043)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936482.1 (18558789..18591709, complement)

NW_024405285.1Genomic Context describing neighboring genes Neighboring gene phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase Neighboring gene phosphoribosyl pyrophosphate amidotransferase Neighboring gene 40S ribosomal protein S29-like Neighboring gene capping protein inhibiting regulator of actin dynamics Neighboring gene centrosomal protein 135

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid activation for nonribosomal peptide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-alanine-activating enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405285.1 Reference HiC_Itri_2 Primary Assembly

    Range
    27707855..27739043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021722819.2 → XP_021578494.1  beta-alanine-activating enzyme isoform X4

    Conserved Domains (3) summary
    COG1520
    Location:607 → 838
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    cd17654
    Location:27 → 383
    A_NRPS_acs4; acyl-CoA synthetase family member 4
    pfam00550
    Location:407 → 458
    PP-binding; Phosphopantetheine attachment site

  2. XM_021722818.2 → XP_021578493.1  beta-alanine-activating enzyme isoform X2

    Conserved Domains (4) summary
    COG1520
    Location:721 → 952
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    pfam00550
    Location:521 → 590
    PP-binding; Phosphopantetheine attachment site
    cl17068
    Location:192 → 497
    AFD_class_I; Adenylate forming domain, Class I superfamily
    cl27678
    Location:1 → 292
    AMP-binding; AMP-binding enzyme

  3. XM_005320024.4 → XP_005320081.1  beta-alanine-activating enzyme isoform X1

    UniProtKB/TrEMBL
    I3M9C8
    Related
    ENSSTOP00015006682.1, ENSSTOT00015007371.1
    Conserved Domains (6) summary
    COG0318
    Location:1 → 539
    CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
    COG2319
    Location:570 → 1016
    WD40; WD40 repeat [General function prediction only]
    pfam00550
    Location:557 → 626
    PP-binding; Phosphopantetheine attachment site
    pfam13360
    Location:874 → 1098
    PQQ_2; PQQ-like domain
    cl11493
    Location:867 → 1098
    PQQ_DH_like; PQQ-dependent dehydrogenases and related proteins
    cl17068
    Location:192 → 533
    AFD_class_I; Adenylate forming domain, Class I superfamily

  4. XM_040292389.1 → XP_040148323.1  beta-alanine-activating enzyme isoform X3

    Conserved Domains (2) summary
    COG1520
    Location:657 → 888
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    cd17654
    Location:1 → 433
    A_NRPS_acs4; acyl-CoA synthetase family member 4

  5. XM_040292390.1 → XP_040148324.1  beta-alanine-activating enzyme isoform X4

    Conserved Domains (3) summary
    COG1520
    Location:607 → 838
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    cd17654
    Location:27 → 383
    A_NRPS_acs4; acyl-CoA synthetase family member 4
    pfam00550
    Location:407 → 458
    PP-binding; Phosphopantetheine attachment site

  6. XM_021722820.2 → XP_021578495.1  beta-alanine-activating enzyme isoform X5

    Conserved Domains (3) summary
    COG1520
    Location:335 → 566
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    cl17068
    Location:3 → 111
    AFD_class_I; Adenylate forming domain, Class I superfamily
    cl27678
    Location:4 → 257
    AMP-binding; AMP-binding enzyme

  7. XM_021722822.2 → XP_021578497.1  beta-alanine-activating enzyme isoform X6

    Conserved Domains (3) summary
    COG1520
    Location:313 → 544
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    NF038078
    Location:55 → 164
    NRPS_MxcG; myxochelin non-ribosomal peptide synthetase MxcG
    cl17068
    Location:18 → 89
    AFD_class_I; Adenylate forming domain, Class I superfamily

  8. XM_021722821.2 → XP_021578496.1  beta-alanine-activating enzyme isoform X5

    Conserved Domains (3) summary
    COG1520
    Location:335 → 566
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    cl17068
    Location:3 → 111
    AFD_class_I; Adenylate forming domain, Class I superfamily
    cl27678
    Location:4 → 257
    AMP-binding; AMP-binding enzyme

  9. XM_040292392.1 → XP_040148326.1  beta-alanine-activating enzyme isoform X6

    Conserved Domains (3) summary
    COG1520
    Location:313 → 544
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    NF038078
    Location:55 → 164
    NRPS_MxcG; myxochelin non-ribosomal peptide synthetase MxcG
    cl17068
    Location:18 → 89
    AFD_class_I; Adenylate forming domain, Class I superfamily

  10. XM_040292391.1 → XP_040148325.1  beta-alanine-activating enzyme isoform X6

    Conserved Domains (3) summary
    COG1520
    Location:313 → 544
    PQQ; Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]
    NF038078
    Location:55 → 164
    NRPS_MxcG; myxochelin non-ribosomal peptide synthetase MxcG
    cl17068
    Location:18 → 89
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
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