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Pla2r1 phospholipase A2 receptor 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101959942, updated on 8-Mar-2024

Summary

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Gene symbol
Pla2r1
Gene description
phospholipase A2 receptor 1
See related
EnsemblRapid:ENSSTOG00015009741
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405303.1 (122828065..122937741, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936469.1 (18679840..18789655)

NW_024405303.1Genomic Context describing neighboring genes Neighboring gene membrane associated ring-CH-type finger 7 Neighboring gene CD302 antigen Neighboring gene integrin subunit beta 6 Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene RNA binding motif single stranded interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secretory phospholipase A2 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405303.1 Reference HiC_Itri_2 Primary Assembly

    Range
    122828065..122937741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005315764.4 → XP_005315821.1  secretory phospholipase A2 receptor

    UniProtKB/TrEMBL
    I3MB76
    Related
    ENSSTOP00015012043.1, ENSSTOT00015013205.1
    Conserved Domains (5) summary
    smart00059
    Location:175 → 223
    FN2; Fibronectin type 2 domain
    cd00037
    Location:246 → 360
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:382 → 506
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 140
    RICIN; Ricin-type beta-trefoil
    cd00161
    Location:45 → 125
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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