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Hao2 hydroxyacid oxidase 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101959173, updated on 1-Mar-2025

Summary

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Gene symbol
Hao2
Gene description
hydroxyacid oxidase 2
See related
EnsemblRapid:ENSSTOG00015011175 RGD:12737076
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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See Hao2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405058.1 (10309168..10329798, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936627.1 (4167501..4179596)

NW_024405058.1Genomic Context describing neighboring genes Neighboring gene dual specificity tyrosine-phosphorylation-regulated kinase 1A-like Neighboring gene 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like Neighboring gene tryptophanyl tRNA synthetase 2, mitochondrial Neighboring gene T-box transcription factor 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyacid oxidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405058.1 Reference HiC_Itri_2 Primary Assembly

    Range
    10309168..10329798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021732973.2 → XP_021588648.1  hydroxyacid oxidase 2 isoform X2

    UniProtKB/TrEMBL
    I3M3W0
    Related
    ENSSTOP00015013733.1, ENSSTOT00015015039.1
    Conserved Domains (1) summary
    pfam01070
    Location:14 → 349
    FMN_dh; FMN-dependent dehydrogenase

  2. XM_040289100.1 → XP_040145034.1  hydroxyacid oxidase 2 isoform X1

    Conserved Domains (1) summary
    cd02809
    Location:8 → 311
    alpha_hydroxyacid_oxid_FMN; Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate ...
Nucleotide Protein
Heading Accession and Version

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