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Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101954489, updated on 10-Aug-2018

Summary

Gene symbol
Spsb2
Gene description
splA/ryanodine receptor domain and SOCS box containing 2
See related
Ensembl:ENSSTOG00000026457
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs

Genomic context

See Spsb2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936709.1 (945322..948101)

NW_004936709.1Genomic Context describing neighboring genes Neighboring gene enolase 2 Neighboring gene leucine rich repeat containing 23 Neighboring gene triosephosphate isomerase 1 Neighboring gene ubiquitin specific peptidase 5

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004936709 Unplaced Scaffold Reference SpeTri2.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
SPRY domain-containing SOCS box protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SpeTri2.0

Genomic

  1. NW_004936709.1 Reference SpeTri2.0

    Range
    945322..948101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021735252.1XP_021590927.1  SPRY domain-containing SOCS box protein 2 isoform X2

    Related
    ENSSTOP00000017478.2, ENSSTOT00000021413.2
    Conserved Domains (2) summary
    cd03719
    Location:222263
    SOCS_SSB2; SOCS (suppressors of cytokine signaling) box of SSB2 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB2 has been shown to bind to MET, the receptor protein-tyrosine kinase for ...
    cd12906
    Location:46217
    SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)
  2. XM_005338317.3XP_005338374.2  SPRY domain-containing SOCS box protein 2 isoform X1

    Conserved Domains (2) summary
    cd03719
    Location:262303
    SOCS_SSB2; SOCS (suppressors of cytokine signaling) box of SSB2 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB2 has been shown to bind to MET, the receptor protein-tyrosine kinase for ...
    cd12906
    Location:86257
    SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)
  3. XM_021735253.1XP_021590928.1  SPRY domain-containing SOCS box protein 2 isoform X3

    Conserved Domains (2) summary
    cd03719
    Location:198239
    SOCS_SSB2; SOCS (suppressors of cytokine signaling) box of SSB2 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB2 has been shown to bind to MET, the receptor protein-tyrosine kinase for ...
    cl02614
    Location:86211
    SPRY; SPRY domain
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