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RNVU1-17 RNA, variant U1 small nuclear 17 [ Homo sapiens (human) ]

Gene ID: 101954269, updated on 13-May-2022

Summary

Official Symbol
RNVU1-17provided by HGNC
Official Full Name
RNA, variant U1 small nuclear 17provided by HGNC
Primary source
HGNC:HGNC:48322
See related
Ensembl:ENSG00000207349 AllianceGenome:HGNC:48322
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
vU1.17; RNU1-127
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Genomic context

See RNVU1-17 in Genome Data Viewer
Location:
1q21.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (143699456..143699619, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (142771591..142771754, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (149194106..149194269, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase 2C-like Neighboring gene uncharacterized LOC124904406 Neighboring gene tRNA-Glu (anticodon TTC) 7-1 Neighboring gene tRNA-Gln (anticodon CTG) 4-2 Neighboring gene tRNA-Asn (anticodon GTT) 22-1 Neighboring gene RNA, variant U1 small nuclear 23

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables pre-mRNA 5'-splice site binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in mRNA 5'-splice site recognition IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104078.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239800
    Related
    ENST00000384619.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    143699456..143699619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    142771591..142771754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)