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RAB5C RAB5C, member RAS oncogene family [ Chrysemys picta (painted turtle) ]

Gene ID: 101938017, updated on 20-Feb-2018

Summary

Gene symbol
RAB5C
Gene description
RAB5C, member RAS oncogene family
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs

Genomic context

See RAB5C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007359872.1 (6927492..6937538, complement)
100 previous assembly Chrysemys_picta_bellii-3.0.1 (GCF_000241765.2) Unplaced Scaffold NW_004848538.1 (1075465..1085513)

NW_007359872.1Genomic Context describing neighboring genes Neighboring gene heat shock protein 30C Neighboring gene heat shock protein 30C-like Neighboring gene potassium voltage-gated channel subfamily H member 4 Neighboring gene hypocretin neuropeptide precursor

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Endocytosis, organism-specific biosystem (from KEGG)
    Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
  • Endocytosis, conserved biosystem (from KEGG)
    Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
  • Phagosome, organism-specific biosystem (from KEGG)
    Phagosome, organism-specific biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
  • Phagosome, conserved biosystem (from KEGG)
    Phagosome, conserved biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_bellii-3.0.3 Primary Assembly

Genomic

  1. NW_007359872.1 Reference Chrysemys_picta_bellii-3.0.3 Primary Assembly

    Range
    6927492..6937538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005294072.2XP_005294129.1  ras-related protein Rab-5C

    Conserved Domains (2) summary
    cd01860
    Location:21183
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
    pfam00071
    Location:23184
    Ras; Ras family
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