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MACORIS macrophage enriched lincRNA repressor of IFN-gamma signaling [ Homo sapiens (human) ]

Gene ID: 101929951, updated on 5-Feb-2023

Summary

Official Symbol
MACORISprovided by HGNC
Official Full Name
macrophage enriched lincRNA repressor of IFN-gamma signalingprovided by HGNC
Primary source
HGNC:HGNC:53963
See related
Ensembl:ENSG00000237797 AllianceGenome:HGNC:53963
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See MACORIS in Genome Data Viewer
Location:
10p11.22
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (31693082..31707447, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (31724498..31739127, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene zinc finger E-box binding homeobox 1 Neighboring gene Sharpr-MPRA regulatory region 3516 Neighboring gene uncharacterized LOC105376484 Neighboring gene glutamate dehydrogenase 1 pseudogene 5 Neighboring gene Rho GTPase activating protein 12 Neighboring gene uncharacterized LOC107984219 Neighboring gene high mobility group box 1 pseudogene 7 Neighboring gene uncharacterized LOC105376485 Neighboring gene ribosomal protein L34 pseudogene 19

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • macrophage-enriched obesity-associated lincRNA serving as a repressor of IFN-gamma signaling

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_184023.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161935

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    31693082..31707447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930805.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    31724498..31739127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080804.1 RNA Sequence