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LOC101929710 uncharacterized LOC101929710 [ Homo sapiens (human) ]

Gene ID: 101929710, updated on 23-Nov-2021

Summary

Gene symbol
LOC101929710
Gene description
uncharacterized LOC101929710
See related
Ensembl:ENSG00000251314
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC101929710 in Genome Data Viewer
Location:
5q15
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (95962001..96631085)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (95297705..95966789)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379091 Neighboring gene Sharpr-MPRA regulatory region 10583 Neighboring gene elongation factor for RNA polymerase II 2 Neighboring gene uncharacterized LOC105379096 Neighboring gene Sharpr-MPRA regulatory region 2569 Neighboring gene fatty acid binding protein 5 pseudogene 5 Neighboring gene MIR583 host gene Neighboring gene microRNA 583 Neighboring gene uncharacterized LOC105379675 Neighboring gene RNA, U6 small nuclear 524, pseudogene Neighboring gene uncharacterized LOC107986365 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 pseudogene Neighboring gene Sharpr-MPRA regulatory region 11450 Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene uncharacterized LOC107986362 Neighboring gene uncharacterized LOC107986364 Neighboring gene uncharacterized LOC107986363 Neighboring gene calpastatin

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
A genome-wide approach accounting for body mass index identifies genetic variants influencing fasting glycemic traits and insulin resistance.
EBI GWAS Catalog
Genetic variants associated with breast size also influence breast cancer risk.
EBI GWAS Catalog
Genome-wide association identifies nine common variants associated with fasting proinsulin levels and provides new insights into the pathophysiology of type 2 diabetes.
EBI GWAS Catalog
Identification of HKDC1 and BACE2 as genes influencing glycemic traits during pregnancy through genome-wide association studies.
EBI GWAS Catalog
Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_130776.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008592, AC008951, AC020900
    Related
    ENST00000502645.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    95962001..96631085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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