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HORMAD2-AS1 HORMAD2 and MTMR3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929664, updated on 13-May-2022

Summary

Official Symbol
HORMAD2-AS1provided by HGNC
Official Full Name
HORMAD2 and MTMR3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:50729
See related
Ensembl:ENSG00000227117 AllianceGenome:HGNC:50729
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MTMR3-AS1
Expression
Ubiquitous expression in liver (RPKM 3.9), testis (RPKM 3.7) and 25 other tissues See more
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Genomic context

See HORMAD2-AS1 in Genome Data Viewer
Location:
22q12.2
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (30008746..30080257, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (30472099..30543609, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (30404735..30476246, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 3 Neighboring gene RNA, U5F small nuclear 5, pseudogene Neighboring gene microRNA 6818 Neighboring gene calponin 2 pseudogene 1 Neighboring gene HORMA domain containing 2 Neighboring gene ribosomal protein L36 pseudogene 17 Neighboring gene RPS3A pseudogene 51

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
A genome-wide association study in Han Chinese identifies multiple susceptibility loci for IgA nephropathy.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110541.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003071
    Related
    ENST00000429350.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    30008746..30080257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    30472099..30543609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)